Stem-loop pxy-mir-8533

Accession

MI0027373

Description

Plutella xylostella pxy-mir-8533 precursor miRNA

Literature search

1 open access papers mention pxy-mir-8533
(1 sentences)

Sequence

17 reads, 527 reads per million, 4 experiments

gucguuuguugugucgaugggcaagcccaaaauccacuagaaagggcgagaaagaaUUCUAGAGGAUCUUGGGCGCGCguacucgacacuacugaacuac
...((((((.(((((((((.((..((((((.((((.((((((....(......)..)))))).)))).))))))..)).)).))))))).)).))))...

Structure

guc    -  u       -  g  aa      a    a      aggg ga 
   guuu gu gugucga ug gc  gcccaa aucc cuagaa    c  g
   |||| || ||||||| || ||  |||||| |||| ||||||    |   
   caag ca cacagcu au CG  CGGGUU UAGG GAUCUU    g  a
cau    u  u       c  g  CG      C    A      --aa aa 

Annotation confidence Not enough data

Genome context

scaffold_2: 1896956-1897055 [-]

Mature pxy-miR-8533

• Accession: MIMAT0033779
• Description: Plutella xylostella pxy-miR-8533 mature miRNA
• Sequence: 57 - UUCUAGAGGAUCUUGGGCGCGC - 78
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24236051
   Identification and developmental profiling of microRNAs in diamondback moth, Plutellaxylostella (L.)
   Liang P, Feng B, Zhou X, Gao X
   PLoS One (2013) 8:e78787