Stem-loop pxy-mir-277

Accession

MI0027378

Description

Plutella xylostella pxy-mir-277 precursor miRNA

Literature search

2 open access papers mention pxy-mir-277
(4 sentences)

Sequence

11903 reads, 733.0 reads per million, 31 experiments

guucgccucggaguuCGUGCCAGGAGUGCGUUUGCAaagcacgcuacaaguuugcguuauugcaaaguugacacugUAAAUGCACUAUCUGGUACGACAccccggggcgagu
.((((((((((.((((((((((((((((((((((((..........(((.((((((....)))))).)))....)))))))))))).)))))))))).)).)))))))))).

Structure

g          a  -          -            aagcacgcua   g      u 
 uucgccucgg gu uCGUGCCAGG AGUGCGUUUGCA          caa uuugcg u
 |||||||||| || |||||||||| ||||||||||||          ||| ||||||  
 gagcggggcc cA AGCAUGGUCU UCACGUAAAUgu          guu aaacgu a
u          c  C          A            ------caca   g      u 

Annotation confidence High

Genome context

scaffold_443: 185665-185776 [+]

Mature pxy-miR-277-5p

• Accession: MIMAT0058618
• Description: Plutella xylostella pxy-miR-277-5p mature miRNA
• Sequence: 16 - CGUGCCAGGAGUGCGUUUGCA - 36
• Evidence: experimental ; Illumina [1]

Mature pxy-miR-277-3p

• Accession: MIMAT0033785
• Description: Plutella xylostella pxy-miR-277-3p mature miRNA
• Sequence: 77 - UAAAUGCACUAUCUGGUACGACA - 99
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24236051
   Identification and developmental profiling of microRNAs in diamondback moth, Plutellaxylostella (L.)
   Liang P, Feng B, Zhou X, Gao X
   PLoS One (2013) 8:e78787