Stem-loop pxy-mir-3286

Accession

MI0027383

Description

Plutella xylostella pxy-mir-3286 precursor miRNA

Sequence

46 reads, 49.0 reads per million, 15 experiments

uaagaagcccaaaacAACUAUUGGUCACUGCACAGGACuaguaacacauuuauacucUUGUGCGUGUUCUAAUAGUUAUugugggugcuucaaa
...(((((((..((.(((((((((.(((.((((((((.((..((....))..)).)))))))))))..))))))))).))...)).)))))...

Structure

uaa     -  -aa  c         -U   U        C  gu  c 
   gaagc cc   aa AACUAUUGG  CAC GCACAGGA ua  aa a
   ||||| ||   || |||||||||  ||| |||||||| ||  ||  
   cuucg gg   uU UUGAUAAUC  GUG CGUGUUcu au  uu c
aaa     u  gug  A         UU   -        c  au  a 

Annotation confidence High

Genome context

scaffold_347: 394559-394652 [-]

Mature pxy-miR-3286-5p

• Accession: MIMAT0033788
• Description: Plutella xylostella pxy-miR-3286-5p mature miRNA
• Sequence: 16 - AACUAUUGGUCACUGCACAGGAC - 38
• Evidence: experimental ; Illumina [1]

Mature pxy-miR-3286-3p

• Accession: MIMAT0058620
• Description: Plutella xylostella pxy-miR-3286-3p mature miRNA
• Sequence: 58 - UUGUGCGUGUUCUAAUAGUUAU - 79
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24236051
   Identification and developmental profiling of microRNAs in diamondback moth, Plutellaxylostella (L.)
   Liang P, Feng B, Zhou X, Gao X
   PLoS One (2013) 8:e78787