Stem-loop pxy-mir-745

Accession

MI0027393

Description

Plutella xylostella pxy-mir-745 precursor miRNA

Sequence

187 reads, 217.0 reads per million, 23 experiments

ucaugucaguugCGGCUCAUCGUCUGGCACUUUGCuuguuaauaucgcUAGCUGCCUAGCGAAGGGCAACAaaugacagag
((.(((((.(((..((((.((((..((((....(((.((.......)).)))))))..)))).))))..))).))))))).

Structure

-  a     g   CG    A    CU    CUUU   u  ua 
 uc uguca uug  GCUC UCGU  GGCA    GCu gu  a
 || ||||| |||  |||| ||||  ||||    ||| ||  u
 ag acagu aAC  CGGG AGCG  CCGU    CGA cg  a
g  -     a   AA    A    AU    ----   U  cu 

Annotation confidence High

Genome context

scaffold_35: 502519-502599 [-]

Mature pxy-miR-745-5p

• Accession: MIMAT0058621
• Description: Plutella xylostella pxy-miR-745-5p mature miRNA
• Sequence: 13 - CGGCUCAUCGUCUGGCACUUUGC - 35
• Evidence: experimental ; Illumina [1]

Mature pxy-miR-745-3p

• Accession: MIMAT0033801
• Description: Plutella xylostella pxy-miR-745-3p mature miRNA
• Sequence: 49 - UAGCUGCCUAGCGAAGGGCAACA - 71
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24236051
   Identification and developmental profiling of microRNAs in diamondback moth, Plutellaxylostella (L.)
   Liang P, Feng B, Zhou X, Gao X
   PLoS One (2013) 8:e78787