Stem-loop pxy-mir-8521b-5

Accession

MI0027394

Description

Plutella xylostella pxy-mir-8521b-5 precursor miRNA

Sequence

6437 reads, 727.0 reads per million, 31 experiments

uccucuugUGUUCGUUCUUGUCUCUGGCGCGGCagucagaauucgggacaagcccggagcgguggCUUGUCCCGAAUUUUGACUCGGCCaaaugaauaccagaacg
...(((.(((((((((........((((.((..((((((((((((((((((((((......).)))))))))))))))))))))))))))))))))))).)))...

Structure

ucc   u         CUUGUCUC    G  GC                     - gg 
   ucu gUGUUCGUU        UGGC CG  agucagaauucgggacaagcc c  a
   ||| |||||||||        |||| ||  ||||||||||||||||||||| |   
   aga cauaaguaa        aCCG GC  UCAGUUUUAAGCCCUGUUCgg g  g
gca   c         --------    -  --                     u gc 

Annotation confidence Medium

Genome context

scaffold_127: 916974-917079 [+]

Clustered miRNAs

6 other miRNAs are < 10 kb from pxy-mir-8521b-5

Mature pxy-miR-8521b-5p

• Accession: MIMAT0058622
• Description: Plutella xylostella pxy-miR-8521b-5p mature miRNA
• Sequence: 9 - UGUUCGUUCUUGUCUCUGGCGCGGC - 33
• Evidence: experimental ; Illumina [1]

Mature pxy-miR-8521b-3p

• Accession: MIMAT0033751
• Description: Plutella xylostella pxy-miR-8521b-3p mature miRNA
• Sequence: 66 - CUUGUCCCGAAUUUUGACUCGGCC - 89
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24236051
   Identification and developmental profiling of microRNAs in diamondback moth, Plutellaxylostella (L.)
   Liang P, Feng B, Zhou X, Gao X
   PLoS One (2013) 8:e78787