miRBase entry: pxy-mir-8510a-8

Stem-loop pxy-mir-8510a-8


Accession
MI0027396
Description
Plutella xylostella pxy-mir-8510a-8 precursor miRNA


Sequence

97 reads, 4450 reads per million, 4 experiments
ucgucgauACUGUGAUCUCACCCGCAAGUcggccgugcacUCGCAGGUGAGAUGAUAGCAucgaagg
...(((((.((((.((((((((.((.(((((....)).))).)).)))))))).)))).)))))...

Structure
ucg     A    G        C  A   -  g 
   ucgau CUGU AUCUCACC GC AGU cg c
   ||||| |||| |||||||| || ||| ||  
   agcuA GAUA UAGAGUGG CG Uca gu c
gga     C    G        A  C   c  g 


Annotation confidence High
Do you think this miRNA is real?

Genome context
scaffold_211: 755257-755323 [-]
Clustered miRNAs
6 other miRNAs are < 10 kb from pxy-mir-8510a-8
Name Accession Chromosome Start End Strand Confidence




Database links

Mature pxy-miR-8510a-5p

Accession MIMAT0033732
Description Plutella xylostella pxy-miR-8510a-5p mature miRNA
Sequence 9 - ACUGUGAUCUCACCCGCAAGU - 29
Evidence experimental
Illumina [1]

Mature pxy-miR-8510a-8-3p

Accession MIMAT0033802
Description Plutella xylostella pxy-miR-8510a-8-3p mature miRNA
Sequence 41 - UCGCAGGUGAGAUGAUAGCA - 60
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24236051
    Identification and developmental profiling of microRNAs in diamondback moth, Plutellaxylostella (L.)
    Liang P, Feng B, Zhou X, Gao X
    PLoS One (2013) 8:e78787