miRBase entry: pxy-mir-8510a-3

Stem-loop pxy-mir-8510a-3


Accession
MI0027398
Description
Plutella xylostella pxy-mir-8510a-3 precursor miRNA


Sequence

99 reads, 4689 reads per million, 4 experiments
ucgucgauACUGUGAUCUCACCCGCAAGUcggccgugcacUCGCAGGUGAGAUGAUAGCAUUgaagg
...(((((.((((.((((((((.((.(((((....)).))).)).)))))))).)))).)))))...

Structure
ucg     A    G        C  A   -  g 
   ucgau CUGU AUCUCACC GC AGU cg c
   ||||| |||| |||||||| || ||| ||  
   agUUA GAUA UAGAGUGG CG Uca gu c
gga     C    G        A  C   c  g 


Annotation confidence High
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Genome context
scaffold_858: 521-587 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from pxy-mir-8510a-3
Name Accession Chromosome Start End Strand Confidence




Database links

Mature pxy-miR-8510a-5p

Accession MIMAT0033732
Description Plutella xylostella pxy-miR-8510a-5p mature miRNA
Sequence 9 - ACUGUGAUCUCACCCGCAAGU - 29
Evidence experimental
Illumina [1]

Mature pxy-miR-8510a-3p

Accession MIMAT0033733
Description Plutella xylostella pxy-miR-8510a-3p mature miRNA
Sequence 41 - UCGCAGGUGAGAUGAUAGCAUU - 62
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24236051
    Identification and developmental profiling of microRNAs in diamondback moth, Plutellaxylostella (L.)
    Liang P, Feng B, Zhou X, Gao X
    PLoS One (2013) 8:e78787