Stem-loop pxy-mir-281

Accession

MI0027400

Description

Plutella xylostella pxy-mir-281 precursor miRNA

Literature search

5 open access papers mention pxy-mir-281
(10 sentences)

Sequence

595225 reads, 20895.0 reads per million, 31 experiments

ucuguuaaugAAGAGAGCUAUCCGUCGACAGUauugaccauaaaaacUGUCAUGGAGUUGCUCUCUUUAugaacgg
.(((((.(((((((((((..(((((.((((((.((.......)).)))))))))))...))))))))))).)))))

Structure

u     a           -UA     C      a  ga 
 cuguu augAAGAGAGC   UCCGU GACAGU uu  c
 ||||| |||||||||||   ||||| |||||| ||  c
 ggcaa uAUUUCUCUCG   AGGUA CUGUca aa  a
-     g           UUG     -      a  au 

Annotation confidence High

Genome context

scaffold_377: 158087-158162 [-]

Mature pxy-miR-281-5p

• Accession: MIMAT0058626
• Description: Plutella xylostella pxy-miR-281-5p mature miRNA
• Sequence: 11 - AAGAGAGCUAUCCGUCGACAGU - 32
• Evidence: experimental ; Illumina [1]

Mature pxy-miR-281-3p

• Accession: MIMAT0033804
• Description: Plutella xylostella pxy-miR-281-3p mature miRNA
• Sequence: 48 - UGUCAUGGAGUUGCUCUCUUUA - 69
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24236051
   Identification and developmental profiling of microRNAs in diamondback moth, Plutellaxylostella (L.)
   Liang P, Feng B, Zhou X, Gao X
   PLoS One (2013) 8:e78787