Stem-loop pxy-mir-8544-1

Accession

MI0027407

Description

Plutella xylostella pxy-mir-8544-1 precursor miRNA

Sequence

58 reads, 1633 reads per million, 4 experiments

ugcggcgccgcuaugAACGCUUUGUGAGCUACAUUAUacauucaacuaaauAAUGUAGCUCACAAAGCGUUCAagucggcaccaag
...((.((((((.((((((((((((((((((((((((............)))))))))))))))))))))))))).)))).))...

Structure

ugc  c    -  a                        acauu 
   gg gccg cu ugAACGCUUUGUGAGCUACAUUAU     c
   || |||| || ||||||||||||||||||||||||      
   cc cggc ga ACUUGCGAAACACUCGAUGUAAua     a
gaa  a    u  -                        aauca 

Annotation confidence Not enough data

Genome context

scaffold_356: 269073-269158 [+]

Mature pxy-miR-8544-5p

• Accession: MIMAT0033811
• Description: Plutella xylostella pxy-miR-8544-5p mature miRNA
• Sequence: 16 - AACGCUUUGUGAGCUACAUUAU - 37
• Evidence: experimental ; Illumina [1]

Mature pxy-miR-8544-3p

• Accession: MIMAT0033812
• Description: Plutella xylostella pxy-miR-8544-3p mature miRNA
• Sequence: 52 - AAUGUAGCUCACAAAGCGUUCA - 73
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24236051
   Identification and developmental profiling of microRNAs in diamondback moth, Plutellaxylostella (L.)
   Liang P, Feng B, Zhou X, Gao X
   PLoS One (2013) 8:e78787