Stem-loop pxy-mir-274

Accession

MI0027410

Description

Plutella xylostella pxy-mir-274 precursor miRNA

Literature search

1 open access papers mention pxy-mir-274
(3 sentences)

Sequence

115434 reads, 3913.0 reads per million, 28 experiments

uguguuagacgaaguuggUUUGUGACCGUCACUAACGGGCAguagucuaugguuugcUCGUUUUGAUGAUCGCAAAAUUaacucgcuugacuau
...(((((.(((.((((((((((((.(((((..(((((((((...........))))))))).))))).)))).))))))))))).)))))...

Structure

ugu     a   a        -    C     CU         uagu 
   guuag cga guuggUUU GUGA CGUCA  AACGGGCAg    c
   ||||| ||| |||||||| |||| |||||  |||||||||    u
   caguu gcu caaUUAAA CGCU GUAGU  UUGCUcguu    a
uau     c   -        A    A     -U         uggu 

Annotation confidence High

Genome context

scaffold_240: 283528-283621 [+]

Mature pxy-miR-274-5p

• Accession: MIMAT0033814
• Description: Plutella xylostella pxy-miR-274-5p mature miRNA
• Sequence: 19 - UUUGUGACCGUCACUAACGGGCA - 41
• Evidence: experimental ; Illumina [1]

Mature pxy-miR-274-3p

• Accession: MIMAT0058628
• Description: Plutella xylostella pxy-miR-274-3p mature miRNA
• Sequence: 58 - UCGUUUUGAUGAUCGCAAAAUU - 79
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24236051
   Identification and developmental profiling of microRNAs in diamondback moth, Plutellaxylostella (L.)
   Liang P, Feng B, Zhou X, Gao X
   PLoS One (2013) 8:e78787