Stem-loop pxy-mir-8536a

Accession

MI0027415

Description

Plutella xylostella pxy-mir-8536a precursor miRNA

Sequence

160 reads, 649.0 reads per million, 6 experiments

uuccugacacgagaUAGUGACAUAGCUGAGAUAGGUuucauuucacacuaacuuAUCCCAGCUAUGUCACUgacuaaugucagauu
...((((((..((.((((((((((((((.((((((((............)))))))).)))))))))))))).))..))))))...

Structure

uuc      cg  a              A        ucauu 
   cugaca  ag UAGUGACAUAGCUG GAUAGGUu     u
   ||||||  || |||||||||||||| ||||||||      
   gacugu  uc gUCACUGUAUCGAC CUAuucaa     c
uua      aa  a              C        ucaca 

Annotation confidence Medium

Genome context

scaffold_50: 599934-600019 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from pxy-mir-8536a

Mature pxy-miR-8536a-5p

• Accession: MIMAT0058629
• Description: Plutella xylostella pxy-miR-8536a-5p mature miRNA
• Sequence: 15 - UAGUGACAUAGCUGAGAUAGGU - 36
• Evidence: experimental ; Illumina [1]

Mature pxy-miR-8536a-3p

• Accession: MIMAT0033816
• Description: Plutella xylostella pxy-miR-8536a-3p mature miRNA
• Sequence: 55 - AUCCCAGCUAUGUCACU - 71
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24236051
   Identification and developmental profiling of microRNAs in diamondback moth, Plutellaxylostella (L.)
   Liang P, Feng B, Zhou X, Gao X
   PLoS One (2013) 8:e78787