Stem-loop pxy-mir-8521b-2

Accession

MI0027417

Description

Plutella xylostella pxy-mir-8521b-2 precursor miRNA

Sequence

6408 reads, 642.0 reads per million, 31 experiments

uucguucuugucucuggcgcgGCAGUCAGAAUUCGGGACgagcccggagcgguggCUUGUCCCGAAUUUUGACUCGGCCaaaugaaaaccagaacgua
..((((((.((.((((((.((..((((((((((((((((((((((......).)))))))))))))))))))))))))))...))..)).))))))..

Structure

uu      u  -c  ---    g  GC                     - gg 
  cguucu gu  uc   uggc cg  AGUCAGAAUUCGGGACgagcc c  a
  |||||| ||  ||   |||| ||  ||||||||||||||||||||| |   
  gcaaga ca  ag   aCCG GC  UCAGUUUUAAGCCCUGUUCgg g  g
au      c  aa  uaa    -  --                     u gc 

Annotation confidence Not enough data

Genome context

scaffold_127: 930604-930701 [+]

Clustered miRNAs

9 other miRNAs are < 10 kb from pxy-mir-8521b-2

Mature pxy-miR-8521b-5p

• Accession: MIMAT0058622
• Description: Plutella xylostella pxy-miR-8521b-5p mature miRNA
• Sequence: 22 - GCAGUCAGAAUUCGGGAC - 39
• Evidence: experimental ; Illumina [1]

Mature pxy-miR-8521b-3p

• Accession: MIMAT0033751
• Description: Plutella xylostella pxy-miR-8521b-3p mature miRNA
• Sequence: 56 - CUUGUCCCGAAUUUUGACUCGGCC - 79
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24236051
   Identification and developmental profiling of microRNAs in diamondback moth, Plutellaxylostella (L.)
   Liang P, Feng B, Zhou X, Gao X
   PLoS One (2013) 8:e78787