miRBase entry: pxy-mir-8521b-2

Stem-loop pxy-mir-8521b-2


Accession
MI0027417
Description
Plutella xylostella pxy-mir-8521b-2 precursor miRNA


Sequence

56 reads, 2824 reads per million, 4 experiments
uucguucuugucucuggcgcggcagucagaauucgggacgagcccggagcgguggCUUGUCCCGAAUUUUGACUCGGCCaaaugaaaaccagaacgua
..((((((.((.((((((.((..((((((((((((((((((((((......).)))))))))))))))))))))))))))...))..)).))))))..

Structure
uu      u  -c  ---    g  gc                     - gg 
  cguucu gu  uc   uggc cg  agucagaauucgggacgagcc c  a
  |||||| ||  ||   |||| ||  ||||||||||||||||||||| |   
  gcaaga ca  ag   aCCG GC  UCAGUUUUAAGCCCUGUUCgg g  g
au      c  aa  uaa    -  --                     u gc 


Annotation confidence Not enough data
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Genome context
scaffold_127: 930604-930701 [+]
Clustered miRNAs
9 other miRNAs are < 10 kb from pxy-mir-8521b-2
Name Accession Chromosome Start End Strand Confidence




Database links

Mature pxy-miR-8521b

Accession MIMAT0033751
Description Plutella xylostella pxy-miR-8521b mature miRNA
Sequence 56 - CUUGUCCCGAAUUUUGACUCGGCC - 79
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24236051
    Identification and developmental profiling of microRNAs in diamondback moth, Plutellaxylostella (L.)
    Liang P, Feng B, Zhou X, Gao X
    PLoS One (2013) 8:e78787