Stem-loop bta-mir-8550

Accession

MI0027424

Description

Bos taurus bta-mir-8550 precursor miRNA

Sequence

443 reads, 1.0 reads per million, 155 experiments

CAGGCUCUGGAACACGGGAGCuuuaguagcugcggcUCCCGGGCUCUAGAGCAUGGg
((.((((((((.(.((((((((.(((...))).)))))))).).)))))))).))..

Structure

--  G        A A        u   u 
  CA GCUCUGGA C CGGGAGCu uag  
  || |||||||| | |||||||| ||| a
  GU CGAGAUCU G GCCCUcgg guc  
gG  A        C G        c   g 

Annotation confidence High

Genome context

7: 6134419-6134475 [+]

Mature bta-miR-8550-5p

• Accession: MIMAT0033821
• Description: Bos taurus bta-miR-8550-5p mature miRNA
• Sequence: 1 - CAGGCUCUGGAACACGGGAGC - 21
• Evidence: experimental ; Illumina [1]

Mature bta-miR-8550-3p

• Accession: MIMAT0051062
• Description: Bos taurus bta-miR-8550-3p mature miRNA
• Sequence: 37 - UCCCGGGCUCUAGAGCAUGG - 56
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24021155
   Profiling microRNA expression in bovine alveolar macrophages using RNA-seq
   "Vegh P, Foroushani AB, Magee DA, McCabe MS, Browne JA, Nalpas NC, Conlon KM, Gordon SV, Bradley DG, MacHugh DE, Lynn DJ"
   "Vet Immunol Immunopathol (2013) 155:238-244