Accession
MI0027432
Description
Amborella trichopoda
atr-MIR8557 precursor miRNA
Sequence
398
reads,
337.0
reads per million, 2 experiments
uagggucgcuUUGUAACUGUAUGGCCAUUUUAGAgcaucacauauggguucuuaauccuugauagagcagaaucgcggaccaggauuuauguauccaacuCCAAAUAGUUGGGAAAAGGCUuug
(((((((..(((.(((((((.(((.......(((((.(((....))))))))...(((.((((........)))).)))...((((......))))....))).))))))).)))..)))))))
(((((((..(((.(((((((.(((.......(((((.(((....))))))))...(((.((((........)))).)))...((((......))))....))).))))))).)))..)))))))
Structure
gc G A -----------------------------------------CCAUUUU a c
uaggguc uUU UAACUGU UGG AGAgc uca a
||||||| ||| ||||||| ||| ||||| |||
guuUCGG AAG GUUGAUA ACC ucuug ggu u
AA G A ucaaccuauguauuuaggaccaggcgcuaagacgagauaguuccuaau - a
Annotation confidence
Low
Do you think this miRNA is real?
Genome context
scaffold00016: 725142-725265 [+]
Database links
Mature atr-miR8557-5p
| Accession | MIMAT0058635 |
| Description | Amborella trichopoda atr-miR8557-5p mature miRNA |
| Sequence | 11 - UUGUAACUGUAUGGCCAUUUUAGA - 34 |
| Evidence |
experimental
unknown |
Mature atr-miR8557-3p
| Accession | MIMAT0033829 |
| Description | Amborella trichopoda atr-miR8557-3p mature miRNA |
| Sequence | 101 - CCAAAUAGUUGGGAAAAGGCU - 121 |
| Evidence |
experimental
Illumina [1] |
References
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