Accession
MI0027433
Description
Amborella trichopoda
atr-MIR8558a precursor miRNA
Sequence
59493
reads,
59794.0
reads per million, 2 experiments
gguuuaaugguggaacauggaaaguggugugguagccggggguuugaGGUUGGGCGGGUUCAGGAAGGCggcuuuuauauucauuaguaacccuagcUUUCCGAAUCCGCCUAUACCUGauacuuccggcuucuauccccucuucauaguccacccgagcu
(((((...((((((..(((((.((.((.((((.((((((((((.(.(((((((((((((((.(((((((.....((((........)))).....)))))))))))))))))).)))).).)))))))))).)))).)))).)))))..)))))).)))))
(((((...((((((..(((((.((.((.((((.((((((((((.(.(((((((((((((((.(((((((.....((((........)))).....)))))))))))))))))).)))).).)))))))))).)))).)))).)))))..)))))).)))))
Structure
aau ac a u u u u g - A ggcuu auu
gguuu ggugga augga ag gg gugg agccgggggu u aGGU UGGGCGGGUUC GGAAGGC uuau c
||||| |||||| ||||| || || |||| |||||||||| | |||| ||||||||||| ||||||| ||||
ucgag ccaccu uacuu uc cc uauc ucggccuuca a UCCA AUCCGCCUAAG CCUUUcg aaug a
--c ga c - c u u G U - auccc auu
Annotation confidence
High
Do you think this miRNA is real?
Genome context
scaffold00017: 2901029-2901189 [+]
Database links
Mature atr-miR8558a-5p
| Accession | MIMAT0061220 |
| Description | Amborella trichopoda atr-miR8558a-5p mature miRNA |
| Sequence | 48 - GGUUGGGCGGGUUCAGGAAGGC - 69 |
| Evidence |
experimental
unknown |
Mature atr-miR8558a-3p
| Accession | MIMAT0033830 |
| Description | Amborella trichopoda atr-miR8558a-3p mature miRNA |
| Sequence | 98 - UUUCCGAAUCCGCCUAUACCUG - 119 |
| Evidence |
experimental
Illumina [1] |
References
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