Accession
MI0027446
Description
Amborella trichopoda
atr-MIR8568 precursor miRNA
Sequence
815
reads,
734.0
reads per million, 2 experiments
guauugcuugcgccaccacugggaacuucucacucuuuagcgcccuugacgagagacuucagaaagaggaauucaauaggACAAGGAUCGCGUAAGCCAAGacggacagcaaauuuuaugaucaccaugcuguuccaucuUGGCUUACUGUGAUCGUUGUCCauggcauccaacaaaugguuagcgaagggugguuguggagaucaggaguggauuccauuggugugucguaaaac
.......(((((((((((.(((((((((((..((((.((((((((((.....(((.((((.....))))..)))....((((((.(((((((((((((((((.((((((((................))))).))).))))))))))).)))))).))))))...((..(((.....)))...)).)))))).)))).))))...))))))...))))).))))).).)))))...
.......(((((((((((.(((((((((((..((((.((((((((((.....(((.((((.....))))..)))....((((((.(((((((((((((((((.((((((((................))))).))).))))))))))).)))))).))))))...((..(((.....)))...)).)))))).)))).))))...))))))...))))).))))).).)))))...
Structure
guauugc - - c --- -ca u - gacgagagacuucagaaagaggaauucaaua G - c - aauuuua
uugcg c cacca uggga acuucu cucu uagc gcccuu ggACAA GAUCGC GUAAGCCAAGa gga cagca u
||||| | ||||| ||||| |||||| |||| |||| |||||| |||||| |||||| ||||||||||| ||| |||||
aaugc g guggu accuu ugagga gagg guug ugggaa CCUGUU CUAGUG CAUUCGGUucu ccu gucgu g
----caa u u u agg cua u g -------gcgauugguaaacaaccuacggua G U a u accacua
Annotation confidence
High
Do you think this miRNA is real?
Genome context
scaffold00024: 4164779-4165014 [-]
Database links
Mature atr-miR8568-5p
| Accession | MIMAT0058646 |
| Description | Amborella trichopoda atr-miR8568-5p mature miRNA |
| Sequence | 81 - ACAAGGAUCGCGUAAGCCAAG - 101 |
| Evidence |
experimental
unknown |
Mature atr-miR8568-3p
| Accession | MIMAT0033844 |
| Description | Amborella trichopoda atr-miR8568-3p mature miRNA |
| Sequence | 141 - UGGCUUACUGUGAUCGUUGUCC - 162 |
| Evidence |
experimental
Illumina [1] |
References
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