Accession
MI0027461
Description
Amborella trichopoda
atr-MIR8576 precursor miRNA
Sequence
493
reads,
402.0
reads per million, 2 experiments
auagacuacuguggguauauccuugugguuaguggagaaaAGCCAUCAUACUGGAUUUGUCGUAaaauugagaugauuucguuuccuuccuuaucagaaaggggcuccacaauggugcggagcggggcuucuuucaaaggggggagugaggguuguucugaaagugggagggagcccucucaauuuuacgACAAAUCCGGUCCGAUGGCUcuucuccacuaaccacaaggauauagggacucuau
(((((.....((...((((((((((((((((((((((((.(((((((..((((((((((((((((((((((((((....))))(((((((((....((((((((((((.(...........).)))))))))))).)))))))))..(((((((.((((.......))))..)))))))))))))))))))))))))))))..))))))).))))))))))))))))))))))))...)))))))
(((((.....((...((((((((((((((((((((((((.(((((((..((((((((((((((((((((((((((....))))(((((((((....((((((((((((.(...........).)))))))))))).)))))))))..(((((((.((((.......))))..)))))))))))))))))))))))))))))..))))))).))))))))))))))))))))))))...)))))))
Structure
cuacu ggg a AU ----------------------gaugauuucguu auca a aaug
auaga gu uauauccuugugguuaguggagaa AGCCAUC ACUGGAUUUGUCGUAaaauuga uccuuccuu gaaaggggcucc c g
||||| || |||||||||||||||||||||||| ||||||| |||||||||||||||||||||| ||||||||| |||||||||||| | u
uaucu ca auauaggaacaccaaucaccucuu UCGGUAG UGGCCUAAACAgcauuuuaacu aggggggaa cuuucuucgggg g g
----- ggg c CC cucccgagggagggugaaagucuuguugggagug ---a c aggc
Annotation confidence
Medium
Do you think this miRNA is real?
Genome context
scaffold00029: 6178354-6178598 [-]
Database links
Mature atr-miR8576-5p
| Accession | MIMAT0033859 |
| Description | Amborella trichopoda atr-miR8576-5p mature miRNA |
| Sequence | 41 - AGCCAUCAUACUGGAUUUGUCGUA - 64 |
| Evidence |
experimental
Illumina [1] |
Mature atr-miR8576-3p
| Accession | MIMAT0058659 |
| Description | Amborella trichopoda atr-miR8576-3p mature miRNA |
| Sequence | 191 - ACAAAUCCGGUCCGAUGGCU - 210 |
| Evidence |
experimental
unknown |
References
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