Accession
MI0027465
Description
Amborella trichopoda
atr-MIR8580 precursor miRNA
Sequence
122
reads,
103.0
reads per million, 2 experiments
uggaaaugagguugcgauauucuuCACCAUCCAUUUUACUUGGACUGUguagguuugaaucguuuuuuaagaccguuucaauggaugucacgucuuuuaagauaguguucaaucuacacUGUCUAAAUAGAAUGGAUGGUGUAggugacugcaaccuuauuucua
((((((((((((((((....(((.((((((((((((((.((((((.(((((((((.((((.(((((..(((((.((..((.....))..)))))))..)))))...))))))))))))).)))))).)))))))))))))).)))....))))))))))))))))
((((((((((((((((....(((.((((((((((((((.((((((.(((((((((.((((.(((((..(((((.((..((.....))..)))))))..)))))...))))))))))))).)))))).)))))))))))))).)))....))))))))))))))))
Structure
auau u C U u --c uu c uu a
uggaaaugagguugcg ucu CACCAUCCAUUUUA UUGGAC GUguagguu gaau guuuu aagac gu ca u
|||||||||||||||| ||| |||||||||||||| |||||| ||||||||| |||| ||||| ||||| || || g
aucuuuauuccaacgu ggA GUGGUAGGUAAGAU AAUCUG cacaucuaa cuug uagaa uucug ca gu g
cagu U A U - uga uu - cu a
Annotation confidence
High
Do you think this miRNA is real?
Genome context
scaffold00003: 1980853-1981017 [-]
Database links
Mature atr-miR8580-5p
| Accession | MIMAT0061221 |
| Description | Amborella trichopoda atr-miR8580-5p mature miRNA |
| Sequence | 25 - CACCAUCCAUUUUACUUGGACUGU - 48 |
| Evidence |
experimental
unknown |
Mature atr-miR8580-3p
| Accession | MIMAT0033864 |
| Description | Amborella trichopoda atr-miR8580-3p mature miRNA |
| Sequence | 120 - UGUCUAAAUAGAAUGGAUGGUGUA - 143 |
| Evidence |
experimental
Illumina [1] |
References
|
