Stem-loop atr-MIR8584

Accession

MI0027470

Description

Amborella trichopoda atr-MIR8584 precursor miRNA

Sequence

986 reads, 757 reads per million, 3 experiments

gguaucagacacuugguuagguggucaagacauuauuuggacacagcaaugacguccacgguucaaaucucauugccgaucuuucuaagaaaguaaaguugacgaggauuUGAACCCUGGUCGUCGCGCUGUGgccuugauguuauagcuaucaaacuaagagcccggacucc
((..((.....(((((((.((((((...(((((((...((.((((((..(((((.(((.(((((((((((..(((.(((((((((...)))))....)))).)))))))))))))).))).))))).)))))).)).)))))))...)))))).)))))))......))..))

Structure

  ua  -agaca       a      caa       uuu  a      aa     u   c           ca   c    ----     u 
gg  uc      cuugguu gguggu   gacauua   gg cacagc  ugacg cca gguucaaaucu  uug cgau    cuuuc  
||  ||      ||||||| ||||||   |||||||   || ||||||  ||||| ||| |||||||||||  ||| ||||    ||||| a
cc  ag      gaaucaa cuaucg   uuguagu   cc GUGUCG  GCUGC GGU CCAAGUuuagg  agc guug    gaaag  
  uc  gcccga       a      aua       --u  g      -C     U   C           --   a    aaau     a 

Annotation confidence Not enough data

Genome context

scaffold00040: 69933-70105 [+]

Mature atr-miR8584

• Accession: MIMAT0033869
• Description: Amborella trichopoda atr-miR8584 mature miRNA
• Sequence: 111 - UGAACCCUGGUCGUCGCGCUGUG - 133
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24357323
   The Amborella genome and the evolution of flowering plants
   "Amborella Genome Project"
   "Science (2013) 342:1241089