Accession
MI0027472
Description
Amborella trichopoda
atr-MIR8585 precursor miRNA
Sequence
707
reads,
676.0
reads per million, 2 experiments
gauaaaaguguagagagagagagcauggaugaagcuguuauugUCACAGGAGAGAUGAUACUGGUUGauauagauuacuuguucuaaacaacCAGUAUCAUCUCGCUGUGACAacaaaucuuuucaauccucucaaccaucaucaucauuguc
(((((..(((..((....((((....((((((((...((.(((((((((..((((((((((((((((...((((........))))..)))))))))))))))).))))))))).))....)))).)))))))).....))..)))..)))))
(((((..(((..((....((((....((((((((...((.(((((((((..((((((((((((((((...((((........))))..)))))))))))))))).))))))))).))....)))).)))))))).....))..)))..)))))
Structure
aa ua -gaga gcau - -cug a GA aua uua
gauaa gug ga gaga ggau gaag uu uugUCACAG GAGAUGAUACUGGUUG uaga c
||||| ||| || |||| |||| |||| || ||||||||| |||||||||||||||| ||||
cuguu uac cu cucu ccua cuuu aa aACAGUGUC CUCUACUAUGACcaac aucu u
ac ua accaa ---- a ucua c -G -aa ugu
Annotation confidence
High
Do you think this miRNA is real?
Genome context
scaffold00046: 3620895-3621047 [-]
Database links
Mature atr-miR8585-5p
| Accession | MIMAT0033871 |
| Description | Amborella trichopoda atr-miR8585-5p mature miRNA |
| Sequence | 44 - UCACAGGAGAGAUGAUACUGGUUG - 67 |
| Evidence |
experimental
Illumina [1] |
Mature atr-miR8585-3p
| Accession | MIMAT0061223 |
| Description | Amborella trichopoda atr-miR8585-3p mature miRNA |
| Sequence | 93 - CAGUAUCAUCUCGCUGUGACA - 113 |
| Evidence |
experimental
unknown |
References
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