Accession
MI0027496
Description
Amborella trichopoda
atr-MIR8607 precursor miRNA
Sequence
240
reads,
205.0
reads per million, 2 experiments
uauugaauaauuuuuuuuuuuuuugaugcuguuaacugucuuacccagguAUAGGCAUAUGGAACCUGGUAUCUagcguugcgaaccuaggcgauaggUUUGUAAUUCUAGAUCUCAGGCUCcauuccuaugccaggguaagacaauuaauaacauaaaaaaaaaguuaacuauugaaua
((((.((((.((..(((((((((((.((.((((((.((((((((((.((((((((...(((((.(((((.((((((.((((((((((((.....)))))))))))).)))))).))))).))))).)))))))).)))))))))).)))))).)))))))))))))..)).)))).))))
((((.((((.((..(((((((((((.((.((((((.((((((((((.((((((((...(((((.(((((.((((((.((((((((((((.....)))))))))))).)))))).))))).))))).)))))))).)))))))))).)))))).)))))))))))))..)).)))).))))
Structure
g a uu a c c a CAU A U c g
uauu aaua uu uuuuuuuuuug ug uguuaa ugucuuaccc gguAUAGG AUGGA CCUGG AUCUag guugcgaaccua g
|||| |||| || ||||||||||| || |||||| |||||||||| |||||||| ||||| ||||| |||||| |||||||||||| c
auaa uuau aa gaaaaaaaaau ac auaauu acagaauggg ccguaucc uacCU GGACU UAGAUC UAAUGUUUggau g
g c uu - a a a --u C C U a
Annotation confidence
Low
Do you think this miRNA is real?
Genome context
scaffold00161: 484165-484344 [+]
Database links
Mature atr-miR8607-5p
| Accession | MIMAT0058684 |
| Description | Amborella trichopoda atr-miR8607-5p mature miRNA |
| Sequence | 51 - AUAGGCAUAUGGAACCUGGUAUCU - 74 |
| Evidence |
experimental
unknown |
Mature atr-miR8607-3p
| Accession | MIMAT0033896 |
| Description | Amborella trichopoda atr-miR8607-3p mature miRNA |
| Sequence | 99 - UUUGUAAUUCUAGAUCUCAGGCUC - 122 |
| Evidence |
experimental
Illumina [1] |
References
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