Accession
MI0027497
Description
Amborella trichopoda
atr-MIR2111 precursor miRNA
Sequence
6061
reads,
9441.0
reads per million, 2 experiments
ugcgcuaacuggcaugagaguggaUAAUCUGUAUCUUGAGGUUUGgguuuagcccacaacuauacuucauuaucaagugucggagucuaguuaacccaaaaCCAGACCUCAGGAUACAGGUUACCUccucuacaauggucaguuuaccucagcca
...((((((((((.((((((.((.((((((((((((((((((((((...........(((((.(((((((........)).))))).))))).........))))))))))))))))))))))))..)))).))...)))))))......)))..
...((((((((((.((((((.((.((((((((((((((((((((((...........(((((.(((((((........)).))))).))))).........))))))))))))))))))))))))..)))).))...)))))))......)))..
Structure
ugc ------ --a - -u a guuuagcccac u - uau gcu aacuggc ug agag gg UAAUCUGUAUCUUGAGGUUUGg aacua acuuc au c ||| ||||||| || |||| || |||||||||||||||||||||| ||||| ||||| || cga uugacug ac ucuc CC AUUGGACAUAGGACUCCAGACC uugau ugagg ug a -ac cuccau gua a cU - --aaaacccaa c c uga
Annotation confidence
High
Do you think this miRNA is real?
Genome context
scaffold00165: 819319-819473 [+]
Database links
Mature atr-miR2111-5p
| Accession | MIMAT0033897 |
| Description | Amborella trichopoda atr-miR2111-5p mature miRNA |
| Sequence | 25 - UAAUCUGUAUCUUGAGGUUUG - 45 |
| Evidence |
experimental
Illumina [1] |
Mature atr-miR2111-3p
| Accession | MIMAT0061227 |
| Description | Amborella trichopoda atr-miR2111-3p mature miRNA |
| Sequence | 102 - CCAGACCUCAGGAUACAGGUUACCU - 126 |
| Evidence |
experimental
unknown |
References
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