Accession
MI0027508
Description
Amborella trichopoda
atr-MIR156d precursor miRNA
Sequence
473
reads,
529.0
reads per million, 2 experiments
agagccuuugaagcuuucucucucuaacaauuugcgguaagaaaggggguaguggguuaugcUGACAGAAGAGAGUGAGCACacauggccaauuguauaaccguaugccgcugucugugcguGCUCACUCCUCUUCUUGUCAGCUuuaucauuucccgcuauugcuuugugccaugaccuccugcauucuccguucu
.((((.......)))).................((((..(((((((((((((((((..((((((((((((((((((((((((.(((((.((...(((((....)))))...)).))))).))))))))).)))))).)))))))......))..))))))...((.....))....)))))))...))))))))...
.((((.......)))).................((((..(((((((((((((((((..((((((((((((((((((((((((.(((((.((...(((((....)))))...)).))))).))))))))).)))))).)))))))......))..))))))...((.....))....)))))))...))))))))...
Structure
agagccuuugaagcuuucucucucuaacaauuu ua --- ---------------- uu ------ - - a c auu a
gcgg agaa agggggu aguggg au gcUGACA GAAGAG AGUGAGCAC caugg ca guaua c
|||| |||| ||||||| |||||| || ||||||| |||||| ||||||||| ||||| || |||||
ugcc ucuu uccucca ucgccc ua CGACUGU CUUCUC UCACUCGug guguc gu cguau c
------------------------------ucu -- acg guaccguguuucguua uu cuauuU U C c u cgc g
Annotation confidence
High
Do you think this miRNA is real?
Genome context
scaffold00065: 3401522-3401718 [-]
Database links
Mature atr-miR156d-5p
| Accession | MIMAT0033910 |
| Description | Amborella trichopoda atr-miR156d-5p mature miRNA |
| Sequence | 63 - UGACAGAAGAGAGUGAGCAC - 82 |
| Evidence |
experimental
Illumina [1] |
Mature atr-miR156d-3p
| Accession | MIMAT0061205 |
| Description | Amborella trichopoda atr-miR156d-3p mature miRNA |
| Sequence | 123 - GCUCACUCCUCUUCUUGUCAGCU - 145 |
| Evidence |
experimental
Illumina [1] |
References
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