Accession
MI0027510
Description
Amborella trichopoda
atr-MIR160 precursor miRNA
Sequence
435
reads,
436.0
reads per million, 2 experiments
ugugaugguuuuuuggagagacaagguggaaaagguaaaugggguuaUGCCUGGCUCCCUGUAUGCCAcucuuuagaguccaaucugagggcugaucggcucaugagggugGCGUGCGAGGAGCCAAGCAUacuuucucucucuagcaaucgaucuuucucucucuaguaaucucucuaucuca
((.(((((....(((((((((.(((((.((...(.((...((((.(((((.(((((((.((((((((((((((..(((.((.(((........))).)))))..)))))))))))))).))))))).)))))...))))....)).)..)).)))))..)))))))))........))))).))
((.(((((....(((((((((.(((((.((...(.((...((((.(((((.(((((((.((((((((((((((..(((.((.(((........))).)))))..)))))))))))))).))))))).)))))...))))....)).)..)).)))))..)))))))))........))))).))
Structure
u ----uuuu -c g aaa g -aau --u C C ua u a uga ug gaugg uuggagaga aaggu ga g ua gggg uaUGC UGGCUCC UGUAUGCCAcucuu gag cc auc g || ||||| ||||||||| ||||| || | || |||| ||||| ||||||| |||||||||||||| ||| || ||| ac cuauc gaucucucu uucua cu c au cucu aUACG ACCGAGG GCGUGCGgugggag cuc gg uag g u ucucuaau cu g -aa g cucu uuc A A ua - c ucg
Annotation confidence
High
Do you think this miRNA is real?
Genome context
scaffold00092: 1776607-1776790 [-]
Database links
Mature atr-miR160-5p
| Accession | MIMAT0033912 |
| Description | Amborella trichopoda atr-miR160-5p mature miRNA |
| Sequence | 48 - UGCCUGGCUCCCUGUAUGCCA - 68 |
| Evidence |
experimental
Illumina [1] |
Mature atr-miR160-3p
| Accession | MIMAT0061206 |
| Description | Amborella trichopoda atr-miR160-3p mature miRNA |
| Sequence | 112 - GCGUGCGAGGAGCCAAGCAU - 131 |
| Evidence |
experimental
Illumina [1] |
References
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