Accession
MI0027514
Description
Amborella trichopoda
atr-MIR166b precursor miRNA
Sequence
470649
reads,
410329.0
reads per million, 2 experiments
auggggggaaaaccuuuguguggAAUGAGGUUUGAUCCAAGAUCUcuuuccauauguggaucaugugaacuugcaccuuugcauguuggcaaacccucuucuaugaauagaUCUCGGACCAGGCUUCAUUCCccacacugguuuuccacaauaaauugaaaccccau
((((((((((((((..((((.(((((((((((((.(((.((((((..(((.(((.(.(((...(((.(((.((((....)))).))).))).....))).))))))).)))))).))).))))))))))))).))))..)))))))).(((....)))...))))))
((((((((((((((..((((.(((((((((((((.(((.((((((..(((.(((.(.(((...(((.(((.((((....)))).))).))).....))).))))))).)))))).))).))))))))))))).))))..)))))))).(((....)))...))))))
Structure
-------------- uu u A A cu c u u --uca g u c
augggg ggaaaacc ugug ggAAUGAGGUUUG UCC AGAUCU uuc aua g gga ugu aac ugca c
|||||| |||||||| |||| ||||||||||||| ||| |||||| ||| ||| | ||| ||| ||| ||||
uacccc ccuuuugg acac CCUUACUUCGGAC AGG UCUaga aag uau c ucu acg uug acgu u
aaaguuaaauaaca uc c C C -u - - u cccaa g u u
Annotation confidence
High
Do you think this miRNA is real?
Genome context
scaffold00004: 1713840-1714006 [+]
Database links
Mature atr-miR166b-5p
| Accession | MIMAT0058691 |
| Description | Amborella trichopoda atr-miR166b-5p mature miRNA |
| Sequence | 24 - AAUGAGGUUUGAUCCAAGAUCU - 45 |
| Evidence |
experimental
unknown |
Mature atr-miR166b-3p
| Accession | MIMAT0033916 |
| Description | Amborella trichopoda atr-miR166b-3p mature miRNA |
| Sequence | 112 - UCUCGGACCAGGCUUCAUUCC - 132 |
| Evidence |
experimental
Illumina [1] |
References
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