Accession
MI0027517
Description
Amborella trichopoda
atr-MIR167 precursor miRNA
Sequence
9220
reads,
10136.0
reads per million, 2 experiments
aaguuuguuucuuucucucucuaaagauuugugagcaucagggguUGAAGCUGCCAGCAUGAUCUGaucccuccucuaaaacccuagaaaucaGAUCAUGCGAGCAGUUUCAUCcgcugguucuugcacuguaucuccucauaaccccugagaaagcuacaagguu
((.(((((..((((((((((....)))..((((((.(((((.((.(((((((((..((((((((((((......((((......)))).))))))))))))..))))))))).)).))))).)))))).....................)))))))..))))).))
((.(((((..((((((((((....)))..((((((.(((((.((.(((((((((..((((((((((((......((((......)))).))))))))))))..))))))))).)).))))).)))))).....................)))))))..))))).))
Structure
g uu ---------ucucuaaagauu c g u CA cccucc aa aa uuugu cuuucuc ugugag aucag gg UGAAGCUGC GCAUGAUCUGau ucua a || ||||| ||||||| |||||| ||||| || ||||||||| |||||||||||| |||| uu gaaca gaaagag acguuc ugguc cC ACUUUGACG CGUACUAGacua agau c g uc uccccaauacuccucuauguc u g U AG -----a cc
Annotation confidence
High
Do you think this miRNA is real?
Genome context
scaffold00002: 9895576-9895741 [-]
Database links
Mature atr-miR167-5p
| Accession | MIMAT0033919 |
| Description | Amborella trichopoda atr-miR167-5p mature miRNA |
| Sequence | 46 - UGAAGCUGCCAGCAUGAUCUG - 66 |
| Evidence |
experimental
Illumina [1] |
Mature atr-miR167-3p
| Accession | MIMAT0058692 |
| Description | Amborella trichopoda atr-miR167-3p mature miRNA |
| Sequence | 94 - GAUCAUGCGAGCAGUUUCAUC - 114 |
| Evidence |
experimental
unknown |
References
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