Accession
MI0027526
Description
Amborella trichopoda
atr-MIR319a precursor miRNA
Sequence
31505
reads,
24616.0
reads per million, 2 experiments
gaggGAGCUCUCUUUAGUCCACCUaugguuggugucuaggggucgaauuaucugccgacucauucauucaaauaauugguagaaaggccgugauuuuucucucuacucuuuaaauuugugaaugaugcgggagauaaauuucacccuugccucaccauucUUGGACUGAAGGGAGCUCCCUc
(((((((((((((((((((((...(((((.(((....((((((.(((((((((.(((..((((((((.....(((..((((((.(((..........))).))))))..))).....))))))))..))).))))))..))))))))))))..)))))...)))))))))))))))))))))
(((((((((((((((((((((...(((((.(((....((((((.(((((((((.(((..((((((((.....(((..((((((.(((..........))).))))))..))).....))))))))..))).))))))..))))))))))))..)))))...)))))))))))))))))))))
Structure
CCU -u gucu c -- g ac ucaaa uu a ccgu
gaggGAGCUCUCUUUAGUCCA auggu ggu aggggu gaa uuaucu ccg ucauucau uaa gguaga agg g
||||||||||||||||||||| ||||| ||| |||||| ||| |||||| ||| |||||||| ||| |||||| |||
cUCCCUCGAGGGAAGUCAGGU uacca ccg uuccca cuu aauaga ggc aguaagug auu ucaucu ucu a
Ucu cu ---- - ua g gu uuuaa uc c uuuu
Annotation confidence
High
Do you think this miRNA is real?
Genome context
scaffold00077: 2616711-2616892 [+]
Database links
Mature atr-miR319a-5p
| Accession | MIMAT0058694 |
| Description | Amborella trichopoda atr-miR319a-5p mature miRNA |
| Sequence | 5 - GAGCUCUCUUUAGUCCACCU - 24 |
| Evidence |
experimental
unknown |
Mature atr-miR319a-3p
| Accession | MIMAT0033928 |
| Description | Amborella trichopoda atr-miR319a-3p mature miRNA |
| Sequence | 161 - UUGGACUGAAGGGAGCUCCCU - 181 |
| Evidence |
experimental
Illumina [1] |
References
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