Accession
MI0027531
Description
Amborella trichopoda
atr-MIR390 precursor miRNA
Sequence
2053
reads,
1525.0
reads per million, 2 experiments
gugaaaucaaagaaagcguugagaaucgguaAAGCUCAGGAGGGAUAGCGCCUcuuuuuaaucugcauauauaacucagaucaauguugaggCGCUAUCUAUCCUGAGUUUUAcgguuucuccuugcucuguaaccuucau
(((((.....(((..(((..(((((.(.(((((((((((((.((((((((((((...((.(((((...........))))).))....)))))))))))).))))))))))))).).)))))..))))))......)))))
(((((.....(((..(((..(((((.(.(((((((((((((.((((((((((((...((.(((((...........))))).))....)))))))))))).))))))))))))).).)))))..))))))......)))))
Structure
-aucaa aa uu u g G -uuu a caua
gugaa aga gcg gagaa c guaAAGCUCAGGA GGAUAGCGCCUc uu aucug u
||||| ||| ||| ||||| | ||||||||||||| |||||||||||| || ||||| a
uacuu ucu cgu cucuu g cAUUUUGAGUCCU UCUAUCGCggag aa uagac u
ccaaug -- uc u g A uugu c ucaa
Annotation confidence
High
Do you think this miRNA is real?
Genome context
scaffold00023: 136000-136140 [+]
Database links
Mature atr-miR390-5p
| Accession | MIMAT0033933 |
| Description | Amborella trichopoda atr-miR390-5p mature miRNA |
| Sequence | 32 - AAGCUCAGGAGGGAUAGCGCCU - 53 |
| Evidence |
experimental
Illumina [1] |
Mature atr-miR390-3p
| Accession | MIMAT0033934 |
| Description | Amborella trichopoda atr-miR390-3p mature miRNA |
| Sequence | 93 - CGCUAUCUAUCCUGAGUUUUA - 113 |
| Evidence |
experimental
Illumina [1] |
References
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