Accession
MI0027533
Description
Amborella trichopoda
atr-MIR394 precursor miRNA
Sequence
1324
reads,
977.0
reads per million, 2 experiments
uuuguuugcauggguuuaucaaaggguuucuugcagagauugUUGGCAUUCUGUCCACCUCCUcccucucucuaaaaaaugagaguuuuucgauuuuaaugcaucgugaggaggugggcauccugccaaccaCACUCUGUGGGCUACUCUCUGUaaaacucaugcaauugcagg
.((((((((((((((((..((.(((((..(((((((((...(((((((...(((((((((((((...(((((........))))).....((((........)))).)))))))))))))...)))))))....)))))))))..))))).))..))))))))))))..)))).
.((((((((((((((((..((.(((((..(((((((((...(((((((...(((((((((((((...(((((........))))).....((((........)))).)))))))))))))...)))))))....)))))))))..))))).))..))))))))))))..)))).
Structure
u -- au a uu -auu UUC -------------------ccu uaa uugu uugcauggguuu ca agggu cuugcagag gUUGGCA UGUCCACCUCCUc cucuc a |||| |||||||||||| || ||||| ||||||||| ||||||| ||||||||||||| ||||| gacg aacguacucaaa GU UCUCA GGGUGUCUC caaccgu acggguggaggag gagag a g uu aU C UC ACac ccu ugcuacguaauuuuagcuuuuu uaa
Annotation confidence
Low
Do you think this miRNA is real?
Genome context
scaffold00001: 3120973-3121146 [+]
Database links
Mature atr-miR394-5p
| Accession | MIMAT0033936 |
| Description | Amborella trichopoda atr-miR394-5p mature miRNA |
| Sequence | 43 - UUGGCAUUCUGUCCACCUCCU - 63 |
| Evidence |
experimental
Illumina [1] |
Mature atr-miR394-3p
| Accession | MIMAT0058695 |
| Description | Amborella trichopoda atr-miR394-3p mature miRNA |
| Sequence | 133 - CACUCUGUGGGCUACUCUCUGU - 154 |
| Evidence |
experimental
unknown |
References
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