Accession
MI0027541
Description
Amborella trichopoda
atr-MIR397b precursor miRNA
Sequence
1878
reads,
2726.0
reads per million, 2 experiments
gaggaaaaccagaaacaUCAUUGAGUGCAGCGUUGGUGaaccccaaaaccuaauuuucaucucucuuguuuggguuucgGCAGCGCUGCACCCAAUUAUGccuuugguauauccuc
(((((..((((((..(((.((((.(((((((((((.((((.((((((.....................)))))).)))).))))))))))).)))).)))..))))))...)))))
(((((..((((((..(((.((((.(((((((((((.((((.((((((.....................)))))).)))).))))))))))).)))).)))..))))))...)))))
Structure
-aa aa C A G c accuaauuu
gagga accaga caU AUUG GUGCAGCGUUG UGaa cccaaa u
||||| |||||| ||| |||| ||||||||||| |||| |||||| c
cuccu ugguuu GUA UAAC CACGUCGCGAC gcuu ggguuu a
aua cc U C G u guucucucu
Annotation confidence
High
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Genome context
scaffold00072: 1231145-1231260 [+]
Database links
Mature atr-miR397b-5p
| Accession | MIMAT0033944 |
| Description | Amborella trichopoda atr-miR397b-5p mature miRNA |
| Sequence | 18 - UCAUUGAGUGCAGCGUUGGUG - 38 |
| Evidence |
experimental
Illumina [1] |
Mature atr-miR397b-3p
| Accession | MIMAT0058700 |
| Description | Amborella trichopoda atr-miR397b-3p mature miRNA |
| Sequence | 80 - GCAGCGCUGCACCCAAUUAUG - 100 |
| Evidence |
experimental
unknown |
References
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