Accession
MI0027543
Description
Amborella trichopoda
atr-MIR477 precursor miRNA
Sequence
216
reads,
197.0
reads per million, 2 experiments
cuagaucuaugcagaugggaguagaggaccaagaaaaauuucagggcaccuaaucuucACUCUCCCUCAAGGGCUUCUgguccuuaccauucaugguaagaggaauAGAGGCCUUAGGGGAGAGUGGaugcuagguguuuugguuucuaucaaucgguuauacuuccuagccuuggccuuag
(((..(((((....)))))..)))(((.((((((((....((((((((((((...((((((((((((..((((((((((.(((((((((....))))..))))).)))))))))).))))))))))))...))))))))))))))))).......(((((.......))))).))))))...
(((..(((((....)))))..)))(((.((((((((....((((((((((((...((((((((((((..((((((((((.(((((((((....))))..))))).)))))))))).))))))))))))...))))))))))))))))).......(((((.......))))).))))))...
Structure
cuagaucuaugcagaugggaguag a ------------------------- aauu auc CA g -- u
agg cca agaaa ucagggcaccua uucACUCUCCCU AGGGCUUCUg uccuu acca u
||| ||| ||||| |||||||||||| |||||||||||| |||||||||| ||||| ||||
ucc ggu ucuuu gguuuuguggau aGGUGAGAGGGG UUCCGGAGAu aggag uggu c
---------------------gau - uccgauccuucauauuggcuaacua ---- cgu -A a aa a
Annotation confidence
High
Do you think this miRNA is real?
Genome context
scaffold00003: 709668-709849 [+]
Database links
Mature atr-miR477-5p
| Accession | MIMAT0058701 |
| Description | Amborella trichopoda atr-miR477-5p mature miRNA |
| Sequence | 59 - ACUCUCCCUCAAGGGCUUCU - 78 |
| Evidence |
experimental
unknown |
Mature atr-miR477-3p
| Accession | MIMAT0033946 |
| Description | Amborella trichopoda atr-miR477-3p mature miRNA |
| Sequence | 107 - AGAGGCCUUAGGGGAGAGUGG - 127 |
| Evidence |
experimental
Illumina [1] |
References
|
