Accession
MI0027545
Description
Amborella trichopoda
atr-MIR828 precursor miRNA
Sequence
57
reads,
65.0
reads per million, 2 experiments
cuccucugacuaaaguuUCUUGCUCAAAUGAGUAUUCCAaucugcuuucucucccuacauacaagcuugauuuuuggggcaugagaugggcucUGUGAUACUCAUUUCAGCAAGcaaccuuacacuggag
((((..((..(((.(((.((((((.(((((((((((.((....((((((((.(((((((........)).....)))))...)))).))))..)).))))))))))).)))))).))).)))))..))))
((((..((..(((.(((.((((((.(((((((((((.((....((((((((.(((((((........)).....)))))...)))).))))..)).))))))))))).)))))).))).)))))..))))
Structure
uc ac a U C C aucu - --u ----- uac
cucc ug uaa guu CUUGCU AAAUGAGUAUU CA gcuu ucuc cccua ca a
|||| || ||| ||| |||||| ||||||||||| || |||| |||| ||||| ||
gagg ac auu caa GAACGA UUUACUCAUAG GU cggg agag ggggu gu a
uc -- c c C U --cu u uac uuuua ucg
Annotation confidence
Medium
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Genome context
scaffold00009: 8165619-8165748 [+]
Database links
Mature atr-miR828-5p
| Accession | MIMAT0058702 |
| Description | Amborella trichopoda atr-miR828-5p mature miRNA |
| Sequence | 18 - UCUUGCUCAAAUGAGUAUUCCA - 39 |
| Evidence |
experimental
unknown |
Mature atr-miR828-3p
| Accession | MIMAT0033948 |
| Description | Amborella trichopoda atr-miR828-3p mature miRNA |
| Sequence | 94 - UGUGAUACUCAUUUCAGCAAG - 114 |
| Evidence |
experimental
Illumina [1] |
References
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