Stem-loop esi-MIR8631

Accession

MI0027567

Description

Ectocarpus siliculosus esi-MIR8631 precursor miRNA

Sequence

gguuaacauggucccccgacucuaauucaugcuuccgugagaagucgcgguagcgccuccguggaaaggcgcggaggcagcuagcacguugaauacuuguagaGUCUGGGGACUAUGUUAACC
((((((((((((((((.(((((((((((((((..((((((....))))))(((((((((((((......))))))))).)))))))...))))).....))))))).))))))))))))))))

Structure

                c       -----     ---   uuccgugagaagucgcgg    -         ga 
gguuaacauggucccc gacucua     auuca   ugc                  uagc gccuccgug  a
|||||||||||||||| |||||||     |||||   |||                  |||| |||||||||   
CCAAUUGUAUCAGGGG CUGagau     uaagu   acg                  aucg cggaggcgc  a
                U       guuca     ugc   ------------------    a         gg 

Annotation confidence Low

Genome context

sctg_144: 348677-348799 [-]

Mature esi-miR8631

• Accession: MIMAT0033970
• Description: Ectocarpus siliculosus esi-miR8631 mature miRNA
• Sequence: 104 - GUCUGGGGACUAUGUUAACC - 123
• Evidence: experimental ; qPCR [1]

References

1. PubMed ID: 24078085
   Computational prediction and experimental validation of microRNAs in the brown alga Ectocarpus siliculosus
   "Billoud B, Nehr Z, Le Bail A, Charrier B"
   "Nucleic Acids Res (2014) 42:417-429