Stem-loop cfa-mir-8799a

Accession

MI0027879

Description

Canis familiaris cfa-mir-8799a precursor miRNA

Sequence

cgaggggaggccggauccugggcugugucccggcgcccagugcucccggcccugCGCUGUUGGAUUCGCGCUCCAGGCcgcgcagccgccucu
.((((((..(((((..(((((((((.((((((((((..((.(((...))).))))))))..)))).)).)).)))))))).))..)).)))).

Structure

c    -  ag  -   au     -  -  u    --      cc  u   c 
 gagg gg  gc cgg  ccugg gc ug gucc  cggcgc  ag gcu  
 |||| ||  || |||  ||||| || || ||||  ||||||  || ||| c
 cucc cc  cg gcC  GGACC CG GC UAGG  GUCGCg  uc cgg  
u    g  ga  c   --     U  C  U    UU      --  c   c 

Annotation confidence Not enough data

Genome context

chr20: 38527785-38527877 [+]

Mature cfa-miR-8799a

• Accession: MIMAT0034289
• Description: Canis familiaris cfa-miR-8799a mature miRNA
• Sequence: 55 - CGCUGUUGGAUUCGCGCUCCAGGC - 78
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545