Stem-loop cfa-mir-8799c

Accession

MI0027909

Description

Canis familiaris cfa-mir-8799c precursor miRNA

Sequence

cccucccggccucugccugucccgggggaggccggauccggggcugugucccggcgcccugugcuccggagccugCGCUGUUGGAUUCGCGCUCCCGGACcgcgcagcccccuccgcggagccgccgcccgagcc
.....(((((((((.((......)).)))))))))....((((((((((.((((......((((((((((((....))).)))))...))))..))))...))))))))))(((.((((.....))))..)))..

Structure

cccucccggccucugccugucccgggggaggccggaucc          --c    cgcccu    ---     -   c 
                                       ggggcugugu   ccgg      gugc   uccgg agc u
                                       ||||||||||   ||||      ||||   ||||| |||  
                                       ccccgacgcg   GGCC      CGCG   AGGUU UCG g
---------------ccgagcccgccgccgaggcgccuc          cCA    ----CU    CUU     G   C 

Annotation confidence Not enough data

Genome context

chr10: 37131530-37131664 [-]

Mature cfa-miR-8799c

• Accession: MIMAT0034318
• Description: Canis familiaris cfa-miR-8799c mature miRNA
• Sequence: 76 - CGCUGUUGGAUUCGCGCUCCCGGAC - 100
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545