Stem-loop cfa-mir-8835

Accession

MI0027921

Description

Canis familiaris cfa-mir-8835 precursor miRNA

Sequence

cgcgagggccagagguauuuccgguuccggugcggggacuUUCGUUCUUGGUGGUCAGUUGUUGcaguugguggguaguaacugagccaagaugcugcggaaucugcuggugaggagcuucucggcuugcguuaauauggagc
.(((.(((((((((((...(((....(((((....(((.(((((((((((((..(((((((((((.........))))))))))))))))))....))))))))))))))...))))))))).))))).)))...........

Structure

----------c   a     -      auu   gguu     gcgg   c      ----       GG           agu 
           gcg gggcc agaggu   ucc    ccggu    gga uUUCGU    UCUUGGU  UCAGUUGUUGc   u
           ||| ||||| ||||||   |||    |||||    ||| ||||||    |||||||  |||||||||||   g
           ugc uucgg ucuucg   agg    ggucg    ucu aaggcg    agaaccg  agucaaugaug   g
cgagguauaau   g     c      ---   -agu     ----   -      ucgu       --           ggu 

Annotation confidence Not enough data

Genome context

chr12: 36887516-36887658 [-]

Mature cfa-miR-8835

• Accession: MIMAT0034328
• Description: Canis familiaris cfa-miR-8835 mature miRNA
• Sequence: 41 - UUCGUUCUUGGUGGUCAGUUGUUG - 64
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545