Stem-loop eca-mir-8919

Accession

MI0028054

Description

Equus caballus eca-mir-8919 precursor miRNA

Sequence

14 reads, 0.0 reads per million, 5 experiments

aggacugguagcaggaccgauggccaacuuuuggaguuucccacgggugucuggaacacuucugagaucugaaauacggaUUCAGGAUCACUGUACUGCCCCGGGccuccaggucccaauuuguguaucgccugaggcaguccug
(((((((.(..((((..(((((..(((..(((((((...(((..((((((.(((.....(((((((.((((.....)))))))))))...))).)).)))).))).))))))).......)))..))))))))).).))))))).

Structure

-       g ag    ac     gc   -----cu       uuu   ac    -  c   aacac       a    a 
 aggacug u  cagg  cgaug  caa       uuuggag   ccc  gggu gu ugg     uucugag ucug a
 ||||||| |  ||||  |||||  |||       |||||||   |||  |||| || |||     ||||||| |||| a
 uccugac g  gucc  gcuau  guu       ggaccuc   GGG  CCCG CA GUC     AGGACUU aggc u
g       g -a    --     gu   uaacccu       --c   -C    U  U   --ACU       -    a 

Annotation confidence Not enough data

Genome context

gb|PJAA01000922.1|: 118-262 [-]

Mature eca-miR-8919-3p

• Accession: MIMAT0034447
• Description: Equus caballus eca-miR-8919-3p mature miRNA
• Sequence: 81 - UUCAGGAUCACUGUACUGCCCCGGG - 105
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545