Stem-loop eca-mir-8975

Accession

MI0028131

Description

Equus caballus eca-mir-8975 precursor miRNA

Sequence

uuggugcucagggcuuggguccuccugucccuggggcuucUCCAGAGCGGCGGAGACUGUGACUGggcagggccuggcugccuucucggccucuucucucuggucagcugcccuuccugggaggccccacaguggcagcucccug
..((.(((....(((((((.((((((......(((((..((((((((.((.((((.(((.((..((((((.......)))))))).))).)))).))))))))..))..)))))....)))))).)))).)))...))).))...

Structure

-uu  u   cagg   -    u      gucccu     uu  --      C  C    A   U  CU      gg 
   gg gcu    gcu uggg ccuccu      ggggc  cU  CCAGAG GG GGAG CUG GA  Gggcag  c
   || |||    ||| |||| ||||||      |||||  ||  |||||| || |||| ||| ||  ||||||  c
   cc cga    uga accc ggaggg      ucccg  ga  ggucuc uc ucuc ggc cu  uccguc  u
guc  u   -cgg   c    c      --uccu     uc  cu      -  u    c   u  --      gg 

Annotation confidence Not enough data

Genome context

chr6: 26987484-26987628 [+]

Mature eca-miR-8975

• Accession: MIMAT0034512
• Description: Equus caballus eca-miR-8975 mature miRNA
• Sequence: 41 - UCCAGAGCGGCGGAGACUGUGACUG - 65
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545