Stem-loop efu-mir-9209c

Accession

MI0028459

Description

Eptesicus fuscus efu-mir-9209c precursor miRNA

Sequence

219 reads, 7.0 reads per million, 8 experiments

cucUAGGACAGUGGUCGGCAAACcaaggcucgcaagccacaugcggcucgcgagccgcgguUUGCCGCUCUGUUGACUAAug
...((((((((.((.(((((((((..(((((((.((((......)))).)))))))..))))))))))))))))..)))...

Structure

cuc   --     U  U         aa       a    ac 
   UAG  GACAG GG CGGCAAACc  ggcucgc agcc  a
   |||  ||||| || |||||||||  ||||||| ||||   
   AUC  UUGUC UC GCCGUUugg  ccgagcg ucgg  u
guA   AG     -  -         cg       c    cg 

Annotation confidence Medium

Genome context

JH977754.1: 2084741-2084822 [+]

Mature efu-miR-9209c-5p

• Accession: MIMAT0034796
• Description: Eptesicus fuscus efu-miR-9209c-5p mature miRNA
• Sequence: 4 - UAGGACAGUGGUCGGCAAAC - 23
• Evidence: experimental ; Illumina [1]

Mature efu-miR-9209c-3p

• Accession: MIMAT0058711
• Description: Eptesicus fuscus efu-miR-9209c-3p mature miRNA
• Sequence: 62 - UUGCCGCUCUGUUGACUAA - 80
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545