Stem-loop efu-mir-9209b

Accession

MI0028463

Description

Eptesicus fuscus efu-mir-9209b precursor miRNA

Sequence

1642 reads, 31.0 reads per million, 8 experiments

aucgagcuauaacaguggUCGGCAAACUGCGGCUCACGAGcuacaugcugcucuuuggcccCUUGAGUGUGGCUCUUCCA
...((((((((.....((..((((((..(((((.............)))))..))).))))).....)))))))).....

Structure

--auc        acagu  UC   -   CU     UCACG 
     gagcuaua     gg  GGC AAA  GCGGC     A
     ||||||||     ||  ||| |||  |||||     G
     CUCGGUGU     Cc  ccg uuu  cgucg     c
ACCUU        GAGUU  --   g   cu     uacau 

Annotation confidence Low

Genome context

JH977725.1: 1836483-1836562 [-]

Mature efu-miR-9209b-5p

• Accession: MIMAT0034800
• Description: Eptesicus fuscus efu-miR-9209b-5p mature miRNA
• Sequence: 19 - UCGGCAAACUGCGGCUCACGAG - 40
• Evidence: experimental ; Illumina [1]

Mature efu-miR-9209b-3p

• Accession: MIMAT0058714
• Description: Eptesicus fuscus efu-miR-9209b-3p mature miRNA
• Sequence: 62 - CUUGAGUGUGGCUCUUCCA - 80
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545