Stem-loop efu-mir-9217

Accession

MI0028475

Description

Eptesicus fuscus efu-mir-9217 precursor miRNA

Sequence

159 reads, 6.0 reads per million, 6 experiments

cccuCCCACAGCUGUUGCCUGAGUuuucaguccaugcugagauugaagccucaugGUGGCUGGUACCAUGGAUCUG
.((.....(((((...(((((((.((((((((((...)).)))))))).)))).)))))))).......)).....

Structure

----c  --uCCCA     GUU   -    U        -  u 
     cc       CAGCU   GCC UGAG uuucaguc ca  
     ||       |||||   ||| |||| |||||||| || g
     GG       GUCGG   UGg acuc gaaguuag gu  
GUCUA  UACCAUG     ---   u    c        a  c 

Annotation confidence Low

Genome context

JH979451.1: 2750-2825 [+]

Mature efu-miR-9217-5p

• Accession: MIMAT0034809
• Description: Eptesicus fuscus efu-miR-9217-5p mature miRNA
• Sequence: 5 - CCCACAGCUGUUGCCUGAGU - 24
• Evidence: experimental ; Illumina [1]

Mature efu-miR-9217-3p

• Accession: MIMAT0058717
• Description: Eptesicus fuscus efu-miR-9217-3p mature miRNA
• Sequence: 56 - GUGGCUGGUACCAUGGAUCUG - 76
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545