Stem-loop efu-mir-9223d

Accession

MI0028490

Description

Eptesicus fuscus efu-mir-9223d precursor miRNA

Sequence

1493 reads, 22.0 reads per million, 8 experiments

ggcgguucucCGACGACAUACCCUGGAAUCAGgcucccuccucucuGGUACCAGGGUGCGUCAUCCAAgaacugucac
(((((((((..((.(((.((((((((.((((((..........)))))).)))))))).))).))..)))))))))..

Structure

--         cC  C   A        A      cucc 
  ggcgguucu  GA GAC UACCCUGG AUCAGg    c
  |||||||||  || ||| |||||||| ||||||     
  cugucaagA  CU CUG GUGGGACC UGGucu    u
ca         AC  A   C        A      cucc 

Annotation confidence High

Genome context

JH977638.1: 13100632-13100709 [-]

Mature efu-miR-9223d-5p

• Accession: MIMAT0034822
• Description: Eptesicus fuscus efu-miR-9223d-5p mature miRNA
• Sequence: 11 - CGACGACAUACCCUGGAAUCAG - 32
• Evidence: experimental ; Illumina [1]

Mature efu-miR-9223d-3p

• Accession: MIMAT0058720
• Description: Eptesicus fuscus efu-miR-9223d-3p mature miRNA
• Sequence: 47 - GGUACCAGGGUGCGUCAUCCAA - 68
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545