Stem-loop efu-mir-9223b-1

Accession

MI0028493

Description

Eptesicus fuscus efu-mir-9223b-1 precursor miRNA

Sequence

236 reads, 5.0 reads per million, 8 experiments

gggaaguucuUGAGUGAUGCACCCUGGAAUCaggcucccuccucucugGUUCCGGGGUGCAUCACCCAAGaacugccgcu
.((.((((((((.(((((((((((((((((((((..........))))))))))))))))))))).)))))))).))...

Structure

--g  a        A                     cucc 
   gg aguucuUG GUGAUGCACCCUGGAAUCagg    c
   || |||||||| |||||||||||||||||||||     
   cc ucaaGAAC CACUACGUGGGGCCUUGgucu    u
ucg  g        C                     cucc 

Annotation confidence High

Genome context

JH977642.1: 13026520-13026599 [+]

Mature efu-miR-9223b-5p

• Accession: MIMAT0034820
• Description: Eptesicus fuscus efu-miR-9223b-5p mature miRNA
• Sequence: 11 - UGAGUGAUGCACCCUGGAAUC - 31
• Evidence: experimental ; Illumina [1]

Mature efu-miR-9223b-1-3p

• Accession: MIMAT0058721
• Description: Eptesicus fuscus efu-miR-9223b-1-3p mature miRNA
• Sequence: 49 - GUUCCGGGGUGCAUCACCCAAG - 70
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545