Stem-loop efu-mir-9223i

Accession

MI0028494

Description

Eptesicus fuscus efu-mir-9223i precursor miRNA

Sequence

1177 reads, 16.0 reads per million, 8 experiments

cccccgaggggUCCCGGAUUGUGAGAGGGugguucucgguugaugcaccccggAAUCGGGCUCCCUCCUCUCUG
.....((((((.((((.(((.((...(((((..((......))..))))))).))))))).)))))).......

Structure

--ccccc      U    G   G  AGA     gu  uc 
       gagggg CCCG AUU UG   GGGug  uc  g
       |||||| |||| ||| ||   |||||  ||   
       CUCCCU GGGC UAA gc   cccac  ag  g
GUCUCUC      C    -   g  ---     gu  uu 

Annotation confidence Low

Genome context

JH979405.1: 2709-2782 [+]

Mature efu-miR-9223i-5p

• Accession: MIMAT0058723
• Description: Eptesicus fuscus efu-miR-9223i-5p mature miRNA
• Sequence: 12 - UCCCGGAUUGUGAGAGGG - 29
• Evidence: experimental ; Illumina [1]

Mature efu-miR-9223i-3p

• Accession: MIMAT0034824
• Description: Eptesicus fuscus efu-miR-9223i-3p mature miRNA
• Sequence: 54 - AAUCGGGCUCCCUCCUCUCUG - 74
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545