Stem-loop efu-mir-9228-1

Accession

MI0028500

Description

Eptesicus fuscus efu-mir-9228-1 precursor miRNA

Sequence

263 reads, 11.0 reads per million, 7 experiments

gaaauaaaucUUGGCUGUGAGGACCUGCUGUGUCUauaacggaagaauugcugugcuggagauacaguagggcuuUGGUGCUCACUGAGUCUUCCUC
............(((((((((.(((((((((((((...((((........)))).....)))))))))).......))).)))))..))))......

Structure

gaaauaaaucUU    --     G   -------          --aua    aag 
            GGCU  GUGAG ACC       UGCUGUGUCU     acgg   a
            ||||  ||||| |||       ||||||||||     ||||    
            CUGA  CACUC UGG       augacauaga     uguc   a
------CUCCUU    GU     G   Uuucggg          ggucg    guu 

Annotation confidence Low

Genome context

JH977665.1: 9282278-9282374 [-]

Mature efu-miR-9228-5p

• Accession: MIMAT0034830
• Description: Eptesicus fuscus efu-miR-9228-5p mature miRNA
• Sequence: 11 - UUGGCUGUGAGGACCUGCUGUGUCU - 35
• Evidence: experimental ; Illumina [1]

Mature efu-miR-9228-1-3p

• Accession: MIMAT0058728
• Description: Eptesicus fuscus efu-miR-9228-1-3p mature miRNA
• Sequence: 76 - UGGUGCUCACUGAGUCUUCCUC - 97
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545