miRBase entry: efu-mir-9230a

Stem-loop efu-mir-9230a


Accession
MI0028502
Description
Eptesicus fuscus efu-mir-9230a precursor miRNA


Sequence

36848 reads, 378.0 reads per million, 8 experiments
cucccaacuguucugaacuccaguuccaggugagaCUCUGGGGACCCAGACUCAUACGGGgagaaACUGGACUGUCUGGCAGCaggcgaaa
.((((..(((((..((..(((((((((..(((.((.(((((....))))).)).)))..)))...))))))...)).)))))..)).))..

Structure
-c  -  aa     cu  -ac      ---   ag   a  C     G 
  uc cc  cuguu  ga   uccagu   ucc  gug ga UCUGG G
  || ||  |||||  ||   ||||||   |||  ||| || |||||  
  ag gg  GACGG  CU   AGGUCA   agG  CAU CU AGACC A
aa  c  aC     -U  GUC      aag   GG   A  C     C 


Annotation confidence Low
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Genome context
JH977887.1: 134849-134939 [-]

Database links

Mature efu-miR-9230a-5p

Accession MIMAT0058724
Description Eptesicus fuscus efu-miR-9230a-5p mature miRNA
Sequence 36 - CUCUGGGGACCCAGACUCAUACGGG - 60
Evidence experimental
Illumina [1]

Mature efu-miR-9230a-3p

Accession MIMAT0034832
Description Eptesicus fuscus efu-miR-9230a-3p mature miRNA
Sequence 66 - ACUGGACUGUCUGGCAGC - 83
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545