miRBase entry: efu-mir-9230a

Dead hairpin entry

Stem-loop efu-mir-9230a


Accession
MI0028502
Description
Eptesicus fuscus efu-mir-9230a precursor miRNA
Comment
The pattern of deep sequencing reads mapping to this locus does not support its annotation as a microRNA.


Sequence

36848 reads, 378.0 reads per million, 8 experiments
cucccaacuguucugaacuccaguuccaggugagaCUCUGGGGACCCAGACUCAUACGGGgagaaACUGGACUGUCUGGCAGCaggcgaaa
.((((..(((((..((..(((((((((..(((.((.(((((....))))).)).)))..)))...))))))...)).)))))..)).))..

Structure
-c  -  aa     cu  -ac      ---   ag   a  C     G 
  uc cc  cuguu  ga   uccagu   ucc  gug ga UCUGG G
  || ||  |||||  ||   ||||||   |||  ||| || |||||  
  ag gg  GACGG  CU   AGGUCA   agG  CAU CU AGACC A
aa  c  aC     -U  GUC      aag   GG   A  C     C