Stem-loop efu-mir-9230c

Accession

MI0028508

Description

Eptesicus fuscus efu-mir-9230c precursor miRNA

Sequence

cugacugcucUGAACUCCAGUUCCAGGCUAGACuguggggacacagacucauucggggagaaacuggacugucuggcagcaggcaga
(((.((((((((.(((((((((((.((..((.(((((....))))).))...))..)))...))))))..)).))).))))).))).

Structure

-   a     -   A  --      ---   -A  -CU  A     g 
 cug cugcu cUG AC  UCCAGU   UCC  GG   AG Cugug g
 ||| ||||| ||| ||  ||||||   |||  ||   || |||||  
 gac gacga ggu ug  agguca   agg  cu   uc gacac g
a   g     c   c  uc      aag   gg  uac  a     a 

Annotation confidence Not enough data

Genome context

JH977699.1: 2125229-2125315 [-]

Mature efu-miR-9230c

• Accession: MIMAT0034837
• Description: Eptesicus fuscus efu-miR-9230c mature miRNA
• Sequence: 11 - UGAACUCCAGUUCCAGGCUAGAC - 33
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545