Stem-loop efu-mir-9228-2

Accession

MI0028511

Description

Eptesicus fuscus efu-mir-9228-2 precursor miRNA

Sequence

758 reads, 24.0 reads per million, 8 experiments

accaggcuaaUUGGCUGUGAGGACCUGCUGUGUCUauaacggaagaauugcugugcuggagacacaguagggcuuUGGUGCUCACUGAGUCUGCCUC
..((((((...((((..(((((.((((((((((((...((((........)))).....)))))))))))).)))))..)).))...))))))....

Structure

--ac      aaU  -  UG     A            --aua    aag 
    caggcu   UG GC  UGAGG CCUGCUGUGUCU     acgg   a
    ||||||   || ||  ||||| ||||||||||||     ||||    
    GUCUGA   AC CG  GUuuc ggaugacacaga     uguc   a
CUCC      GUC  U  UG     g            ggucg    guu 

Annotation confidence Low

Genome context

JH977611.1: 8675141-8675237 [-]

Mature efu-miR-9228-5p

• Accession: MIMAT0034830
• Description: Eptesicus fuscus efu-miR-9228-5p mature miRNA
• Sequence: 11 - UUGGCUGUGAGGACCUGCUGUGUCU - 35
• Evidence: experimental ; Illumina [1]

Mature efu-miR-9228-2-3p

• Accession: MIMAT0058727
• Description: Eptesicus fuscus efu-miR-9228-2-3p mature miRNA
• Sequence: 76 - UGGUGCUCACUGAGUCUGCCUC - 97
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545