Stem-loop efu-mir-9236c

Accession

MI0028524

Description

Eptesicus fuscus efu-mir-9236c precursor miRNA

Sequence

340145 reads, 8160.0 reads per million, 6 experiments

ccacuuuauuuuUCUAGUUGUAGGACUUCCAUUCAGCCAGCuuucaggcuggucugaaugaugauaguucuauauuUUAGUUGUAAUUUUGAUGu
.....((((....((((.((((((((((((((((((((((((....)))))).)))))))..)).)))))))))..))))..)))).........

Structure

----ccacu    uuuU    -U         -  --       -      u 
         uuau    CUAG  UGUAGGACU UC  CAUUCAG CCAGCu u
         ||||    ||||  ||||||||| ||  ||||||| ||||||  
         AAUG    GAUU  auaucuuga ag  guaaguc ggucgg c
uGUAGUUUU    --UU    uu         u  ua       u      a 

Annotation confidence Low

Genome context

JH977796.1: 705042-705136 [+]

Mature efu-miR-9236c-5p

• Accession: MIMAT0058734
• Description: Eptesicus fuscus efu-miR-9236c-5p mature miRNA
• Sequence: 13 - UCUAGUUGUAGGACUUCCAUUCAGCCAGC - 41
• Evidence: experimental ; Illumina [1]

Mature efu-miR-9236c-3p

• Accession: MIMAT0034851
• Description: Eptesicus fuscus efu-miR-9236c-3p mature miRNA
• Sequence: 77 - UUAGUUGUAAUUUUGAUG - 94
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545