miRBase entry: efu-mir-9236c

Dead hairpin entry

Stem-loop efu-mir-9236c


Accession
MI0028524
Description
Eptesicus fuscus efu-mir-9236c precursor miRNA
Comment
The pattern of deep sequencing reads mapping to this locus does not support its annotation as a microRNA.


Sequence

340145 reads, 8160.0 reads per million, 6 experiments
ccacuuuauuuuUCUAGUUGUAGGACUUCCAUUCAGCCAGCuuucaggcuggucugaaugaugauaguucuauauuUUAGUUGUAAUUUUGAUGu
.....((((....((((.((((((((((((((((((((((((....)))))).)))))))..)).)))))))))..))))..)))).........

Structure
----ccacu    uuuU    -U         -  --       -      u 
         uuau    CUAG  UGUAGGACU UC  CAUUCAG CCAGCu u
         ||||    ||||  ||||||||| ||  ||||||| ||||||  
         AAUG    GAUU  auaucuuga ag  guaaguc ggucgg c
uGUAGUUUU    --UU    uu         u  ua       u      a