miRBase entry: efu-mir-9246a

Stem-loop efu-mir-9246a

Accession

MI0028535

Description

Eptesicus fuscus efu-mir-9246a precursor miRNA

Sequence

gccucggggccagggccgggggugagcccggggugagcugcugcUGCCCACGGCUCCCCUGGUUGCAAGccucgugggg
.((.((((((...(((((((((..((((..((((.(((....)))))))..)))))))))))))....)))))).))..

Structure

-g  u      -cag         ug    cg    g   u 
  cc cggggc    ggccggggg  agcc  gggu agc g
  || ||||||    |||||||||  ||||  |||| |||  
  gg gcuccG    UUGGUCCCC  UCGG  CCCG Ucg c
gg  u      AACG         --    CA    -   u

Annotation confidence Not enough data

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Genome context

JH977771.1: 803559-803637 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from efu-mir-9246a

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature efu-miR-9246a

Accession	MIMAT0034860
Description	Eptesicus fuscus efu-miR-9246a mature miRNA
Sequence	45 - UGCCCACGGCUCCCCUGGUUGCAAG - 69
Evidence	experimental Illumina [1]

References

PubMed ID: 24692655
Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
"Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
"Mol Biol Evol (2014) 31:1536-1545